Literature of interest


Within and beyond the theme of the workshop

  • Bashford JD, Tsohantjis and Jarvis PD, A supersymmetric model for the evolution of the genetic code, Proc Nat Acad Sci USA 95 (1998) 987-992

  • Bashford JD and Jarvis PD, The genetic code as a periodic table: algebraic aspects, physics/0001066, BioSystems 57 (2000) 147-161

  • Bashford JD , Jarvis PD, Sumner JG and Steel MA, U(1) X U(1) X U(1) symmetry of the Kimura 3ST model and phylogenetic branching processes, J Phys A: Math Gen 37 (2004) L81-L89

  • Bashford JD and Jarvis PD , A base-pairing model of duplex formation. I. Watson-Crick pairing geometries, Biopolymers 78 (2005), 287-297

  • Bashford JD and Jarvis PD, Spectroscopy of the genetic code, Chapter in `Quantum Aspects of Life', 43pp, eds Derek Abbott, Paul Davies and Arun K Pati (World Scientific and Imperial College Press, 2008); see http://eprints.utas.edu.au, http://www.worldscibooks.com

  • ElSawi K, Taormina A, Twarock R and Vaughan L, Dynamical implications of viral tiling theory, J Theor Biol 252(2) (2008) 357-369; arXiv:0711.0541

  • Englert F, Peeters K and Taormina A, The twenty-four near-instabilities of Kaspar-Klug viruses, Phys Rev E78 (2008) 031908; arXiv:0804.4275

  • Grayson N, Taormina A and Twarock R, DNA duplex cage structures with icosahedral symmetry , Theoretical Computer Science (in press) (2008); arXiv:07114344

  • Jarvis PD and Bashford JD, Quantum field theory and phylogenetic branching, J Phys A A34 (2001) L703-L707

  • Jarvis PD , Bashford JD and Sumner JD, Path integral formulation and Feynman rules for phylogenetic branching processes, J Phys A 38(44) (2005) 9621--9647

  • Jarvis PD and Sumner JG, Using the tangle: a consistent construction of phylogenetic distance matrices for quartets, Mathematical Biosciences 204 (2006) 49-67

  • Jonoska N, Taormina A and Twarock R, DNA cages with icosahedral symmetry in bionanotechnology, Natural Computing series (in press) (2008); arXiv:0804:3224

  • Keef T, Taormina A and Twarock R, Assembly Models for Papovaviridae based on Tiling Theory , Phys Biol 2 (2005)175-188;arXiv:q-bio/0508031

  • Keef T, Taormina A and Twarock R, Classification of capped tubular viral particles in the family of Papovaviridae, J Phys: Condens. Matter 18 (2006)S375-S387;arXiv:q-bio/0510028

  • Peeters K and Taormina A, Dynamics of icosahedral viruses: what does viral tiling theory teach us?, Computational and Mathematical Methods in Medicine, 9(03-04) (2008)211-220;arXiv:0806.1029

  • Peeters K and Taormina A, Group theory of icosahedral virus capsids: a dynamical top-down approach, J Theor Biol (2008);arXiv:0806.1029

  • Sumner JG and Jarvis PD, Entanglement invariants and phylogenetic branching, J Math Biol 51(1) (2005) 18--36

  • Sumner JG ,Charleston MA, Jermiin LS and Jarvis PD, Markov invariants, plethysms, and phylogenetics, J Theoretical Biology 253 (2008) 601--615 preprint arXiv:0711.3503v2 [q-bio.PE]

  • Sumner JG and Jarvis PD, Markov invariants and the isotropy subgroup of a quartet, preprint arXiv:0809.3070 [q-bio]


    • Last update 7 November 2008

    To add to this list, simply email AnneTaormina.